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Published online before print May 29, 2003, 10.1148/radiol.2281020254
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(Radiology 2003;228:70-75.)
© RSNA, 2003


Computer Applications

Wavelet Compression of Low-Dose Chest CT Data: Effect on Lung Nodule Detection1

Jane P. Ko, MD, Henry Rusinek, PhD, David P. Naidich, MD, Georgeann McGuinness, MD, Ami N. Rubinowitz, MD, Barry S. Leitman, MD and Jennifer M. Martino, MD

1 From the Thoracic Division, Department of Radiology, New York University Medical Center, 560 First Ave, New York, NY 10016. From the 2001 RSNA scientific assembly. Received March 12, 2002; revision requested May 24; final revision received October 3; accepted December 14. Supported by a Scholars Award from the RSNA Research and Education Foundation. Address correspondence to J.P.K. (e-mail: jane.ko@med.nyu.edu).


    ABSTRACT
 TOP
 ABSTRACT
 INTRODUCTION
 MATERIALS AND METHODS
 RESULTS
 DISCUSSION
 REFERENCES
 
PURPOSE: To assess the effect of using a lossy Joint Photographic Experts Group standard for wavelet image compression, JPEG2000, on pulmonary nodule detection at low-dose computed tomography (CT).

MATERIALS AND METHODS: One hundred sets of lung CT data ("cases") were compressed to 30:1, 20:1, and 10:1 levels by using a wavelet-based JPEG2000 method, resulting in 400 test cases. Each case consisted of nine 1.25-mm sections that had been obtained with 20–40 mAs. Four thoracic radiologists independently interpreted the test case images. Performance was measured by using area under the receiver operating characteristic (ROC) curve (Az) and conventional sensitivity and specificity analyses.

RESULTS: There were 51 cases with and 49 without lung nodules. Az values were 0.984, 0.988, 0.972, 0.921, respectively, for original and 10:1, 20:1, and 30:1 compressed images. Az values decreased significantly at 30:1 (P = .014) but not at 10:1 compression, with a trend toward significant decrease at 20:1 (P = .051). Specificity values were unaffected by compression (>98.0% at all compression levels). Sensitivity values were 86.3% (176 of 204 test cases with nodules), 77.9% (159 of 204 cases), 76.5% (156 of 204 cases), and 70.1% (143 of 204 cases), respectively, for original and 10:1, 20:1, and 30:1 compressed images. Results of logistic regression model analysis confirmed the significant effects of compression rate and nodule attenuation, size, and location on sensitivity (P < .05).

CONCLUSION: While no reduction in nodule detection at 10:1 compression levels was demonstrated by using ROC analysis, a significant decrease in sensitivity was identified. Further investigation is needed before widespread use of image compression technology in low-dose chest CT can be recommended.

© RSNA, 2003

Index terms: Data compression • Images, processing • Images, quality • Lung, CT, 60.12118 • Lung, nodule, 60.31


    INTRODUCTION
 TOP
 ABSTRACT
 INTRODUCTION
 MATERIALS AND METHODS
 RESULTS
 DISCUSSION
 REFERENCES
 
Multi–detector row computed tomography (CT) enables imaging of the entire thorax in contiguous 1-mm sections during a single patient breath hold. The availability of 1-mm sections enables detection of small pulmonary nodules and characterization of their morphology and volume (1). However, each multi–detector row CT study results in as many as 300 transverse images that require more than 150 Mb of computer storage per study. There is increasing interest in applying computer software for computer-aided diagnosis and three-dimensional image reconstruction to high-spatial-resolution CT data; however, the large number of images in and large size of the CT data sets are an obstacle to routine clinical use and widespread adoption of such computer software applications (2).

Image compression enables reduction of the size of image data sets, thereby increasing the speed of data transmission and decreasing data storage requirements. However, compression would be acceptable only if diagnostic accuracy and visual interpretation were not hindered. Lossless compression methods enable reversible reduction of image data without alteration, but the degree of compression is limited to 2:1. Alternatively, lossy compression methods reduce data size to levels greater than 2:1 but irreversibly change the original data.

The Joint Photographic Experts Group (JPEG) standard (3), which is a cosine transform method, and wavelet methods are the major compression methods available (3,4). Most of the more recent studies have involved the evaluation of wavelet methods, which have been shown to achieve compression levels greater than 10:1 with minimal degradation of images and were the bases for the development of a new JPEG2000 (5,6) standard for image compression (3,4).

Previous radiologic analysis of image compression techniques has primarily been concerned with the effect of lossy image compression on chest radiographs and has concentrated less on the effect of image compression on chest CT scans (7,8). To our knowledge, the effect of lossy image compression at high-spatial-resolution multi–detector row CT, particularly low-dose CT—the use of which as a method of screening for lung cancer in high-risk populations is currently being debated—has not been studied extensively.

The purpose of this study was to assess the effect of lossy JPEG2000 wavelet image compression on the detection of pulmonary nodules at low-dose CT.


    MATERIALS AND METHODS
 TOP
 ABSTRACT
 INTRODUCTION
 MATERIALS AND METHODS
 RESULTS
 DISCUSSION
 REFERENCES
 
Patient and Image Selection
The study was approved by the research board at our institution as an "exempt" study. Informed consent was not required. A lung cancer screening database at our institution was reviewed, and the reports of CT studies performed after March 1, 2002 were reviewed consecutively by one radiologist for reported nodules. Fifty nodules were selected in chronologic order from the reports of these CT studies. The 50 nodules were selected from 23 low-dose chest CT data sets in 23 patients. For each of the 50 nodules (nodule cases), nine consecutive transverse sections were selected so that the center section depicted the nodule where it appeared largest and most conspicuous. Nodules were included in the study if their maximal dimension was larger than 2 mm. The nodule cases were selected so that there was equal distribution of cases among the upper, middle, and lower thorax. The nodules were also selected with the goal that subsolid nodules, with their faint appearance at CT that may be more affected by image compression, would comprise approximately one-third of the cases.

Additionally, 50 control cases were selected from CT data obtained in two patients who reportedly did not have lung nodules. Each control case comprised nine contiguous transverse sections that did not contain nodules. Each control case was selected so that the level of its sections, in terms of craniocaudal location in the thorax, was close to the level of the sections of a nodule case. Thus, CT data from a total of 25 patients—eight men and 17 women ranging in age from 39 to 75 years (mean age, 57 years)—were used.

Nodule characteristics.—Nodule characteristics—specifically, attenuation, location, and size—were recorded by the radiologist (J.P.K.) who selected the cases. Nodules were classified as solid, calcified, or subsolid in terms of attenuation. Subsolid nodules had a component of ground-glass opacity. The location of a nodule was categorized as peripheral if it was within the peripheral third of a lobe and as central if it was not. Nodules that abutted the pleura, including those adjacent to fissures, were noted. Nodule size was expressed as the largest cross-sectional dimension, and nodule measurement was performed by using electronic calipers at an image workstation (Wizard; Siemens Medical Systems, Iselin, NJ). Nodules were subcategorized as those equal to or smaller than 5 mm and those larger than 5 mm. More than one nodule appeared on the center section in 11 cases. The coordinates of all nodules were recorded.

Imaging protocol.—Low-dose screening chest CT had been performed with a multi–detector row CT scanner with an adaptive array detector (Somatom Volume Zoom 4; Siemens Medical Systems). All CT images had been acquired helically in one breath hold without the administration of intravenous contrast material and with collimation of 1.0 mm, tube current of 20–40 mAs, and 120 kV. Pitch was variable and ranged from 1.4 to 1.7. CT data were reconstructed into 1.25-mm transverse sections at 1.0-mm intervals; a high-frequency reconstruction algorithm and a matrix of 512 x 512 pixels were used. The field of view ranged between 28 and 35 cm.

Wavelet Compression of CT Data
All identifying patient information was removed from the images. CT data in Digital Imaging and Communications in Medicine (DICOM) version 3.0 format were transferred within the hospital computer network to a research computer (Dell Dimension, Austin, Tex) with a Windows NT operating system. A Java implementation (JJ2000; available for noncommercial use at jj2000.epfl.ch) of the JPEG2000 standard was adapted to 16-bit medical images. JPEG2000 is a discrete wavelet transform that uses a Daubechies biorthogonal basis. JPEG2000 supports error resilience, random access, and the ability to perform simple manipulation of compressed-domain data.

Each image of the 100 original cases was compressed to levels of 10:1, 20:1, and 30:1, yielding 400 test cases for interpretation. The actual mean compression levels achieved for the 10:1, 20:1, and 30:1 nominal levels, respectively, were 10.00 ± 0.04 (SD), 19.97 ± 0.10, and 30.05 ± 0.19.

Image Interpretation
Interpretation of images was performed at a personal computer (DeskPro; Compaq, Houston, Tex) with a Windows NT operating system and a diagnostic-quality picture archiving and communication systems (PACS) monitor (M21LMAX; Image Systems, Minnetonka, Minn). The monitor satisfied the American College of Radiology standards for teleradiology and digital image data management (9,10) and had a luminance of 65 foot-lamberts, an aperture grille pitch of 0.25 mm, a resolution of 1,200 x 1,600, and a refresh rate of 75-Hz.

Four thoracic radiologists, who had 2–22 years of experience in chest radiology, served as independent readers. The radiologist who selected the cases did not serve as a reader so that memory bias could be minimized. Each reader evaluated the 400 test cases in four 11/2-hour sessions that were separated by at least 7 days. During each session a reader evaluated 100 test cases, with a short break in the middle of the session to minimize fatigue. Test cases in reading sessions 1, 2, and 3 consisted of images compressed to 30:1, 20:1, and 10:1, respectively, and at session 4 original images were interpreted. Within each session, images from the nodule and control test cases were randomly presented to the readers. The randomization scheme ensured that nodule images that differed in image compression rates were presented and interpreted after a sufficient time delay. The readers were unaware of the ratio of nodule test cases to control test cases, the levels of compression being evaluated, and the order in which images compressed with the different levels were presented. Images were presented with specific window settings (window level, -600 HU; window width, 1,500 HU), but each reader was able to adjust window settings to his or her preference.

For each test case, the readers assessed whether one or more nodules were present specifically on the fifth of nine contiguous sections. For each nodule they identified, the readers rated their degree of confidence according to a scoring system (Table 1) and marked the coordinates of the nodule.


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TABLE 1. Scoring System for Reader Confidence

 
The coordinates of all the nodules that were scored were reviewed (J.P.K.) to ensure that the nodules marked by the readers matched the nodules that were originally chosen to be evaluated in the test cases. For control and nodule cases in which at least two of the four readers assigned confidence scores of 2 or higher to nodules of approximately the same coordinates, the uncompressed original CT images were reviewed (J.P.K.) to ensure that nodules were not overlooked during the initial selection of cases. For the 11 nodule cases with more than one nodule on the center section, if a reader selected a nodule that was not a nodule being tested, the score used was that assigned to the detected nodule.

Statistical Analysis
Reader performance was expressed as the area under the receiver operating characteristic (ROC) curve (Az) (11). Statistically significant differences between compression levels were tested by using a univariate z-score test area. A statistical software package (SSPS, Chicago, Ill) was used. Differences in the Az values between compression levels were identified by using a one-tailed Student t test. Conventional measurements of accuracy, sensitivity, and specificity were calculated by using ratings of 1 and 2 as negative responses and 3 and 4 as positive responses; significant differences were identified by using one-tailed {chi}2 tests. P < .05 was considered to indicate a statistically significant difference.

Logistic regression analysis was used to identify factors predictive of a true-positive reading. In this analysis, the outcome variable was the binary assessment (nodule detected or not detected) for each positive case, while the potentially predictive factors included in the model were compression level (coded as a continuous variable), nodule opacity (ground glass vs solid), nodule size category (≤5 mm, >5 mm), and nodule location. Nodule location was represented in the model as two binary variables: (a) central location and (b) adjacency to pleura. After the main effect was determined, the interactions between the four variables describing nodule characteristics and the compression levels were determined.


    RESULTS
 TOP
 ABSTRACT
 INTRODUCTION
 MATERIALS AND METHODS
 RESULTS
 DISCUSSION
 REFERENCES
 
A rating of 3 of 4 was assigned at the same coordinates in one of the 50 control cases by a majority of readers. The location matching the coordinates was reviewed and was judged to contain a nodule; therefore, our study now consisted of 51 nodule cases and 49 control cases. In two of the 176 test cases (images from 11 nodule cases at four different compression levels read by four radiologists) with more than one nodule, a radiologist selected a nodule that was not the nodule being tested. Artifacts were never assigned a rating higher than a correctly identified nodule in the same case.

The sizes of the nodules evaluated ranged between 2 and 15 mm in diameter (mean, 5.8 mm ± 3.2 [SD]; median, 5 mm). Among the positive cases, 31 had nodules in the right lung and 20 had nodules in the left lung. There were 15 subsolid nodules, 13 of which had pure ground-glass opacity and two of which had mixed ground-glass and solid opacity. Thirty-three nodules were solid, and three were calcified. There were 32 nodules that abutted the pleura, with 24 touching the costal pleura, seven adjacent to a fissure, and one touching both the costal pleura and fissure. Seven nodules were central, and 44 were peripheral in location.

The mean Az values for all four radiologists were 0.984 ± 0.012 (SD), 0.988 ± 0.007, 0.972 ± 0.014, and 0.921 ± 0.034, respectively, for the original images and the images compressed at 10:1, 20:1, and 30:1 (Figs 13). Compared with Az values for interpretation of uncompressed images, the Az values decreased significantly (P = .014) when readers interpreted images at 30:1 compression. There was a trend toward a significant difference at 20:1 compression (P = .051), and no significant difference was identified at 10:1 compression. Az values for all four radiologists decreased as compression levels increased from 10:1 to 30:1 (Table 2). Statistically significant differences between the correlated ROC curves for images at 10:1 compression and images at 30:1 compression were found for three of four readers with the univariate z-score area test. The SDs of the mean Az values for all readers increased as compression levels increased, indicating increased variation in performance (Table 2).



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Figure 1. Scatterplot shows ROC curves that represent the combined performance of four thoracic radiologists in detection of lung nodules at CT with different levels of image compression. There is a significant decrease in the Az at the 30:1 image compression level, with a trend toward decreased performance at the 20:1 compression level. Uncmp = uncompressed.

 


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Figure 2. Low-dose chest CT images compressed 30:1, 20:1, and 10:1 and original noncompressed CT image. On the basis of the image compressed to 30:1, only one radiologist assigned a confidence score of 3 or 4 to a ground-glass nodule (arrow), while all radiologists assigned a score of 3 or 4 to this nodule on the basis of the original image. The demarcation of the nodule from the surrounding lung is reduced at higher levels of compression.

 


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Figure 3. Low-dose chest CT images compressed 30:1, 20:1, and 10:1 and original noncompressed CT image. With 30:1 compression, information loss is most noticeable in the lung parenchyma (short white arrows) and in a subtle small vessel (long white arrow in upper left and lower right images). A noncalcified nodule (black arrow) was detected and assigned a confidence score of 4 by all four radiologists at all compression levels.

 

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TABLE 2. Individual and Combined Reader Az Values for Images at Different Compression Levels

 
Sensitivity values were 86.3% (176 of 204 test cases), 77.9% (159 of 204 test cases), 76.5% (156 of 204 test cases), and 70.1% (143 of 204 test cases), respectively, for original images and 10:1, 20:1, and 30:1 compressed images. Sensitivity significantly decreased with 10:1, 20:1, and 30:1 compressed images (P = .01, P = .004, and P < .001, respectively; {chi}2 test) versus noncompressed images. Specificity was very high and was unaffected (P > .05) by image compression; specificity values were 98.5% (193 of 196 test cases), 99.0% (194 of 196 test cases), 99.0% (195 of 196 test cases), and 98.5% (193 of 196 test cases), respectively, for original images and 10:1, 20:1, and 30:1 compressed images.

Linear regression model analysis revealed a significant main effect for the compression rate as well as for each nodule characteristic, meaning that each variable had an independent effect on sensitivity (Table 3). The ORs and 95% CIs for each characteristic are reported in Table 3. The interactions between nodule characteristics and compression rate were significant for nodule location and size (Table 3).


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TABLE 3. Logistic Regression Model for Effect of Variables on Nodule Detection Rate

 
Sensitivity was lower for the detection of ground-glass nodules (65.0%, 156 of 240 test cases) than for non–ground-glass nodules (83.0%, 478 of 576 test cases) when data for all compression levels were combined (Table 4). Sensitivity was higher for nodules larger than 5 mm (82.3%, 303 of 368 test cases) than for nodules 5 mm or smaller (73.9%, 331 of 448 test cases) (Table 4). Peripheral nodules were detected more frequently overall (80.4%, 566 of 704 test cases) than were central nodules (60.7%, 68 of 112 test cases), and, similarly, the sensitivity for peripheral nodules that abutted the pleura (84.2%, 337 of 400 test cases) was higher than that for those that did not (75.3%, 229 of 304 test cases) (Table 4).


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TABLE 4. Sensitivity as a Function of Nodule Characteristics

 

    DISCUSSION
 TOP
 ABSTRACT
 INTRODUCTION
 MATERIALS AND METHODS
 RESULTS
 DISCUSSION
 REFERENCES
 
Multi–detector row CT technology enables improved spatial and temporal resolution by reducing both partial volume effect and motion artifacts (2). The overall benefits for morphologic and temporal characterization of lung nodules are large enough that, despite the large size of the data sets generated at multi–detector row CT of the chest, effort to fully utilize this technology is warranted. This may be particularly pertinent for teleradiology, which enables expert interpretation of CT studies of patient populations that are not in close proximity.

There is preliminary evidence that image compression can actually improve image quality by reducing image noise, but at high levels of compression, texture and fine details can be lost, with subsequent loss of image quality (1214). Two-dimensional discrete cosine transform and wavelet methods are most commonly used for image compression, although three-dimensional wavelet compression (1517) and raw data compression (18) have also been studied. A group of wavelet methods that are based on a discrete wavelet transform that uses Daubechies biorthogonal basis are currently being developed as a JPEG2000 standard for general-purpose image compression.

Previous evaluation of radiologic image compression techniques has primarily focused on their use in chest radiography. In chest radiography, direct cosine transform methods (12,1923) preserved image quality and were described as "visually lossless" at levels up to 11:1 (12) and 13:1 (22). There was also no significant decrease in accuracy at compression levels of 20–25:1 for diagnosis of nodules (19,20,22) and interstitial lung disease (20,23) on chest radiographs. Wavelet compression at chest radiography (13,14,24) preserved image quality at levels up to 11:1 (12), 20:1 (24), and 40:1 (13) and diagnostic accuracy at levels up to 80:1 (14). The effect of image compression at CT (7,8,17,25,26), particularly chest CT (7,8), has been studied less frequently than its effect at chest radiology. CT images, particularly those reconstructed by using a high-frequency kernel, may be less amenable to compression than chest radiographs because of the lower percentage of energy in the lowest frequency subband at CT (4).

In our study, which involved 100 cases and four radiologists, we did not find a reduction in Az values for nodule detection when we evaluated uncompressed and 10:1 compressed images. However, we did observe significant decreases in sensitivity—from 86.3% with original images to 77.9% with 10:1 and 76.5% with 20:1 compressed images. We did not observe any change in specificity due to compression, meaning that the JPEG2000 algorithm did not introduce artifacts that were construed as nodules. Although our study results corroborate with those of Li et al (8), it should be noted that there were major differences in the design of the two studies, including our use of high-spatial-resolution sections, multiple contiguous sections per case, a diagnostic-quality PACS monitor, and an experimental design that minimized reader memory bias.

Results of logistic regression analysis in our study revealed that compression rate and nodule attenuation, size, and location had independent and significant effects on sensitivity. The nodule characteristics that had the strongest negative effects on sensitivity were size of 5 mm or less (OR, 0.27; 95% CI, 0.18, 0.42) and ground-glass opacity (OR, 0.31; 95% CI, 0.19, 0.49). Rusinek et al (27) reported sensitivity values of 58%–62% for detection of central nodules—versus 74% for detection of peripheral nodules—at standard and low-dose chest CT. Our study also revealed higher detection rates for nodules that touch the pleura. The higher sensitivity values for nodules in the peripheral and, particularly, the subpleural regions may be related to the paucity of vessels in these regions.

Our results suggest that the loss of sensitivity with increasing image compression levels is related to small nodule size and central nodule location. Although compression may result in a change in the appearance of the texture of ground-glass nodules and potentially decrease detection rates, results of our logistic regression analysis did not reveal a significant interaction between nodule attenuation and image compression level.

We concentrated on the evaluation of low-dose CT images with the expectation that our results would be applicable to common diagnostic CT techniques used to evaluate individuals suspected or known to have pulmonary nodules. According to the findings of Rusinek et al (27), nodule detection is decreased at low-dose chest CT. Diagnostic CT images may be affected by image compression to a lesser degree than low-dose CT images; this may be a topic for future investigation. Before image compression at CT performed for lung nodule detection is widely accepted, we need to ensure that use of image compression does not compromise detection of other pulmonary diseases that may be coexistent, such as infiltrative lung disease.

In conclusion, results of ROC analysis did not demonstrate a reduction in diagnostic accuracy at 10:1 levels of JPEG2000 wavelet compression. However, a decrease in sensitivity at this level was identified, highlighting the need for further investigation before image compression technology is widely used at low-dose chest CT.


    ACKNOWLEDGMENTS
 
The authors thank James S. Babb, PhD, for his expert statistical advice. We also acknowledge Marilyn Noz, PhD, Emilio Vega, RT, Fiona Feeley, RT, and the Radiology Informatics Division of the Department of Radiology of New York University Medical Center.


    FOOTNOTES
 
Abbreviations: Az = area under ROC curve, JPEG = Joint Photographic Experts Group, OR = odds ratio, PACS = picture archiving and communication system, ROC = receiver operating characteristic

Author contributions: Guarantors of integrity of entire study, J.P.K., H.R.; study concepts and design, J.P.K., H.R.; literature research, J.P.K.; clinical studies, D.P.N., G.M., A.N.R., B.S.L., J.M.M.; data acquisition, J.P.K.; data analysis/interpretation, J.P.K., H.R.; statistical analysis, H.R.; manuscript preparation, J.P.K., H.R.; manuscript definition of intellectual content, J.P.K., H.R., D.P.N.; manuscript editing, revision/review, and final version approval, all authors.


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 DISCUSSION
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B. Kim, K. H. Lee, K. J. Kim, R. Mantiuk, S. Hahn, T. J. Kim, and Y. H. Kim
Prediction of Perceptible Artifacts in JPEG 2000 Compressed Chest CT Images Using Mathematical and Perceptual Quality Metrics
Am. J. Roentgenol., February 1, 2008; 190(2): 328 - 334.
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A. Fidler, B. Likar, and H. Rupert Ringl
What Is Wrong with Compression Ratio in Lossy Image Compression?
Radiology, October 1, 2007; 245(1): 299 - 300.
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H. S. Woo, K. J. Kim, T. J. Kim, S. Hahn, B. Kim, Y. H. Kim, and K. H. Lee
JPEG 2000 Compression of Abdominal CT: Difference in Tolerance Between Thin- and Thick-Section Images
Am. J. Roentgenol., September 1, 2007; 189(3): 535 - 541.
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Y. J. Jeong, C. A. Yi, and K. S. Lee
Solitary Pulmonary Nodules: Detection, Characterization, and Guidance for Further Diagnostic Workup and Treatment
Am. J. Roentgenol., January 1, 2007; 188(1): 57 - 68.
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H. Ringl, R. E. Schernthaner, A. A. Bankier, M. Weber, M. Prokop, C. J. Herold, and C. Schaefer-Prokop
JPEG2000 Compression of Thin-Section CT Images of the Lung: Effect of Compression Ratio on Image Quality
Radiology, September 1, 2006; 240(3): 869 - 877.
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J. P. Ko, J. Chang, E. Bomsztyk, J. S. Babb, D. P. Naidich, and H. Rusinek
Effect of CT Image Compression on Computer-assisted Lung Nodule Volume Measurement
Radiology, October 1, 2005; 237(1): 83 - 88.
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S. Suryanarayanan, A. Karellas, S. Vedantham, S. M. Waldrop, and C. J. D'Orsi
Detection of Simulated Lesions on Data-compressed Digital Mammograms
Radiology, July 1, 2005; 236(1): 31 - 36.
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